Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898422.1_cds_XP_016448522.1_43165
CDS Infomation

[gene=LOC107773631] [db_xref=GeneID:107773631] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X2] [protein_id=XP_016448522.1] [location=complement(join(20001..20941,21024..21263,21499..21546,21660..22389))] [gbkey=CDS]
Sequence

ATGACTTTGGCTTATTCTTTTATTTGCCTCCTTTTATCTCTTCTTCTGATCTTAGTTCAG
GCAACGGGCAGAAATGATTCTATTTGTCCAAAGTCCTTTTCATGTGGTGAAAATCTTACT
GACCTGAGCTTTCCTTTCTCTCTTTCCACACAACCGGACTGTGGAATAATTTCTATTTCT
GGCTGTGATGCTAAATCATTTCCAATAATCCAACTGCTTCCTGGAGGAGATTGGTACTAT
GTTTTAGGGAAGAATAATTCATCAGTTTGGCTTAGCGACCCGAAGCTTCAAATGACGTTG
ACACAACACAAGTGCCAGGCTTTTAACAACAATTTCTCCCTTCCGAACTCTCCTTCTATT
TCTTTTACTATGCTTACGCTTTATAACTTCTTCAAATGCAACAGCACCAGCAATAATACG
CCAAATATTACCCAGAAGAAGAATGACACTTTCGCTGGTTATAAAATGTACAATGGATGT
GAAGGCTTTAGCATATACTACAAGCGTCTCGGAGATGATAAAGTTAAAGACATTCGAGCT
GACAATCTTCCTGACAACTGTTCACTTATCAGATTGCCAATTCACTCACTATCAAGTGAT
GGAGATTTGTTCCACTTGTTAGGTCCCGAAGTTCTAGTAGAATGGGAACTGTCTGATGAC
TGTTACCAATGTCACTATAGTGGAGGTCAATGCCAGACTGATATTACCAACAACTTTCGT
TGTCACAAAGATGCAAACACAACTAGAAGAAGTATGATGGGGCTGATTCTGGCAGCAGGA
TTGGTGATGATAACTTGTTTAGTTGTCTACCTTATCTTGCGTTACAAGAAGAGGAAATTT
AGTCCATCCCGCTTCCTCTCAACAAAGAAATTCTCAGATATATTTAAGCATGATTTCGAA
GGAGGCAGTATATTCTTTGGTGTTCCAGTCTTCTCTTATTCAGAACTTGAAGAAGCCACA
AATGATTTCAATTCCTCTAGAGTACTTGGAGATGGAGGTTTTGGAACTGTTTACTATGGA
AAACTTAAGGATGGAAGAGAGGTTGCTGTAAAGCGCCTTTACGAGCACAACTGCAAGCGA
ATGGAGCAGTTTGTAAATGAAATTGAGATCCTTACTAGACTAAGGCACAACAATCTAGTC
ACCCTCTATGGCTGCACTTCAAGCCGAAGCCGTGAACTACTCCTTGTCTATGAATATATT
CTTAATGGAACTCTTGCTGATCATCTCCATGGTCGCAGAGCGAAGCAACGATCACTCGCG
TGGCCAATCCGCATGAACATTGCTGTAGAAACTGCTGGTGCATTGGCTTACTTGCATGCA
TCTGACGTAATACACTGCGATGTCAAGACTAATAACATACTCCTTGATCACAATTTTAGT
GTTAAAGTTGCAGATTTTGGGATTTCAAGGCTCTTCCCAGATGATGTCTCTCATATTTCA
ACTGCACCCCGTGGAACCCCTGGCTATATTGATCCAAAGTATCATGAATGTTACCAGCTG
ACTAGTAAAAGTGATGTTTATAGCTTCGGGGTGGTCCTTGTCGAGCTCATTTCATCAATG
CCAGCTGTGGACATGAATAGGCATAACCAAGAGATTAATTTGGCTAACTTTGCAATAAAC
AAGATTGTAAAATGTGCATTTAACGAGTTGATCAATCCATCCCTGGGGTTCGATTCAGAC
ACCAAGATTTGGGAAATGACTACTTCTGTGGCAGAGTTGGCTTTTCTATGCTTGCAGACA
GATAGGGACATGAGGCCTACTATGGTTGAAGTTTTGGATACTCTAAAGGAGATTCAGACT
AGTGAATTTGATGATGAGAAGAAAGCTAAAGTAGTAGCAGCTCCTCCTTTCCCTGAATCA
GAAGATATTTTATTATTGAAGCAAGTCAAATCACTACCTTCACCAAATTTTGTAACTGAT
AAATGGATTACTTGCTATGATATAAATAATACAAAGTAG

Peptide Sequence

PEP ID

XP_016448522.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X2 [Nicotiana tabacum]
Sequence

MTLAYSFICLLLSLLLILVQATGRNDSICPKSFSCGENLTDLSFPFSLSTQPDCGIISIS
GCDAKSFPIIQLLPGGDWYYVLGKNNSSVWLSDPKLQMTLTQHKCQAFNNNFSLPNSPSI
SFTMLTLYNFFKCNSTSNNTPNITQKKNDTFAGYKMYNGCEGFSIYYKRLGDDKVKDIRA
DNLPDNCSLIRLPIHSLSSDGDLFHLLGPEVLVEWELSDDCYQCHYSGGQCQTDITNNFR
CHKDANTTRRSMMGLILAAGLVMITCLVVYLILRYKKRKFSPSRFLSTKKFSDIFKHDFE
GGSIFFGVPVFSYSELEEATNDFNSSRVLGDGGFGTVYYGKLKDGREVAVKRLYEHNCKR
MEQFVNEIEILTRLRHNNLVTLYGCTSSRSRELLLVYEYILNGTLADHLHGRRAKQRSLA
WPIRMNIAVETAGALAYLHASDVIHCDVKTNNILLDHNFSVKVADFGISRLFPDDVSHIS
TAPRGTPGYIDPKYHECYQLTSKSDVYSFGVVLVELISSMPAVDMNRHNQEINLANFAIN
KIVKCAFNELINPSLGFDSDTKIWEMTTSVAELAFLCLQTDRDMRPTMVEVLDTLKEIQT
SEFDDEKKAKVVAAPPFPESEDILLLKQVKSLPSPNFVTDKWITCYDINNTK

Transcript Sequence

Gene sequence data has not been registered.